Detailed information of matrix profile PH0084.1

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Profile summary
Name: Irx3_2
Matrix ID: PH0084.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P81067  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 36 39 32 49 15 22 95 1 95 4 2 2 74 25 32 25 33 ]
C [ 16 16 15 16 20 1 1 97 0 1 0 1 3 24 26 24 16 ]
G [ 13 27 11 9 20 3 1 0 1 0 97 1 1 24 15 13 11 ]
T [ 36 18 41 27 45 74 2 2 4 95 1 95 22 28 27 38 40 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0084.1 PH0084 1 Irx3_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: