Detailed information of matrix profile PH0083.1

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Profile summary
Name: Irx3_1
Matrix ID: PH0083.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P81067  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 41 30 30 44 16 22 94 0 92 6 1 4 72 22 29 22 34 ]
C [ 19 13 11 18 17 1 1 98 0 2 1 1 5 26 23 28 21 ]
G [ 13 39 7 7 23 5 1 1 2 0 98 1 1 22 19 16 9 ]
T [ 28 19 52 31 45 72 4 1 6 92 0 94 22 30 29 33 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0083.1 PH0083 1 Irx3_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: