Detailed information of matrix profile PH0082.1

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Profile summary
Name: Irx2
Matrix ID: PH0082.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P81066  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 47 36 37 22 21 22 95 0 96 3 1 3 74 20 30 28 42 ]
C [ 8 27 12 29 21 1 1 97 0 1 1 1 3 25 26 13 10 ]
G [ 11 20 11 19 17 3 1 1 1 0 97 1 1 14 13 13 8 ]
T [ 34 18 40 30 40 74 3 1 3 96 0 95 22 41 32 47 39 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0082.1 PH0082 1 Irx2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: