Detailed information of matrix profile PH0057.1

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Profile summary
Name: Hoxb13
Matrix ID: PH0057.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70321  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 15 33 40 40 3 2 7 16 97 3 12 31 9 19 13 15 ]
C [ 33 11 12 9 6 0 0 1 0 5 0 1 9 18 27 20 ]
G [ 30 35 21 14 7 1 0 0 3 0 12 67 77 33 12 27 ]
T [ 22 22 26 37 84 97 93 83 0 92 76 2 5 30 48 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0057.1 PH0057 1 Hoxb13 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: