Detailed information of matrix profile PH0056.1

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Profile summary
Name: Hoxa9
Matrix ID: PH0056.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P09631  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 43 25 21 53 45 19 5 4 36 97 1 11 30 10 14 8 16 ]
C [ 11 28 15 17 6 3 1 0 0 0 10 2 1 66 56 20 34 ]
G [ 8 9 13 13 16 2 1 0 1 0 0 63 60 16 7 50 12 ]
T [ 38 38 51 17 32 76 93 95 63 2 88 24 9 9 23 21 39 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0056.1 PH0056 1 Hoxa9 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: