Detailed information of matrix profile PH0051.1

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Profile summary
Name: Hoxa4
Matrix ID: PH0051.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P06798  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 18 37 44 23 17 1 94 98 1 0 91 68 5 46 65 20 22 ]
C [ 53 26 35 12 11 8 6 0 1 0 0 5 27 10 7 31 38 ]
G [ 16 27 9 56 5 0 0 1 0 6 8 11 13 23 20 10 17 ]
T [ 12 10 12 9 68 91 0 1 98 94 1 17 56 21 8 39 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0051.1 PH0051 1 Hoxa4 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: