Detailed information of matrix profile PH0049.1

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Profile summary
Name: Hoxa2
Matrix ID: PH0049.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P31245  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 29 14 21 42 19 10 1 90 98 0 0 93 18 11 13 9 ]
C [ 27 9 9 8 8 45 6 9 1 0 1 0 52 62 22 24 ]
G [ 17 4 44 28 62 30 0 1 0 1 9 6 21 8 32 8 ]
T [ 28 73 26 22 11 16 93 0 0 98 90 1 9 19 33 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0049.1 PH0049 1 Hoxa2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: