Detailed information of matrix profile PB0161.1

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Profile summary
Name: Rxra_2
Matrix ID: PB0161.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P28700  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 20 29 34 5 44 64 36 6 16 46 5 16 14 8 40 ]
C [ 29 16 21 21 47 14 19 53 76 1 1 49 14 38 19 36 ]
G [ 18 36 16 24 7 32 10 6 4 6 6 6 51 16 52 10 ]
T [ 22 28 35 21 40 10 7 5 15 77 47 40 20 31 22 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0161.1 PB0161 1 Rxra_2 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: