Detailed information of matrix profile PB0104.1

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Profile summary
Name: Zscan4_1
Matrix ID: PB0104.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 20 36 25 49 12 2 1 3 0 96 0 77 4 75 36 44 30 ]
C [ 16 27 30 12 5 1 3 0 97 1 97 6 38 5 23 11 29 ]
G [ 31 15 24 21 6 97 1 97 0 3 1 5 4 4 9 22 20 ]
T [ 33 23 21 18 77 0 96 0 3 1 2 12 53 16 32 23 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0104.1 PB0104 1 Zscan4_1 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: