Detailed information of matrix profile PB0101.1

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Profile summary
Name: Zic1_1
Matrix ID: PB0101.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P46684  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 12 15 9 11 11 5 17 3 6 3 5 9 22 19 ]
C [ 59 72 79 78 84 83 61 23 7 3 5 3 11 27 ]
G [ 19 7 3 5 3 7 18 59 83 84 78 79 31 37 ]
T [ 10 6 9 5 3 6 5 15 5 11 11 9 36 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0101.1 PB0101 1 Zic1_1 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: