Detailed information of matrix profile PB0082.1

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Profile summary
Name: Tcf3_1
Matrix ID: PB0082.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9Z1J1  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 37 25 58 4 76 6 4 96 97 94 13 21 49 40 31 32 ]
C [ 20 23 17 4 40 1 1 87 0 0 0 6 17 13 20 23 21 ]
G [ 18 12 13 13 50 1 0 6 0 1 2 80 48 31 15 16 16 ]
T [ 43 27 45 24 7 23 93 3 3 1 4 2 13 8 25 30 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0082.1 PB0082 1 Tcf3_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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