Detailed information of matrix profile PB0079.1

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Profile summary
Name: Sry_1
Matrix ID: PB0079.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q05738  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 21 41 36 18 96 5 7 92 1 91 93 2 27 33 31 33 ]
C [ 22 25 18 27 1 1 1 0 7 1 1 1 14 25 12 25 ]
G [ 32 10 12 14 1 1 1 7 0 1 1 1 16 18 26 24 ]
T [ 25 25 34 42 2 93 91 1 92 7 5 96 43 24 32 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0079.1 PB0079 1 Sry_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: