Detailed information of matrix profile PB0073.1

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Profile summary
Name: Sox7_1
Matrix ID: PB0073.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P40646  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 26 25 32 49 34 25 23 7 24 93 0 1 3 3 8 19 27 30 25 43 30 22 ]
C [ 8 23 12 13 17 19 16 53 24 0 1 0 1 0 9 37 21 13 28 24 17 12 ]
G [ 17 30 27 14 30 22 20 9 2 0 0 0 95 0 4 7 7 17 10 18 23 30 ]
T [ 49 22 29 24 19 34 42 31 50 6 99 98 0 96 79 36 44 39 38 15 31 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0073.1 PB0073 1 Sox7_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: