Detailed information of matrix profile PB0071.1

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Profile summary
Name: Sox4_1
Matrix ID: PB0071.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q06945  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 36 24 8 1 0 22 0 1 1 1 1 19 22 25 26 22 ]
C [ 16 16 22 24 53 76 0 0 0 1 0 10 48 20 29 30 12 ]
G [ 18 23 36 20 9 0 0 0 0 98 0 5 8 15 16 24 23 ]
T [ 40 25 19 48 37 24 77 99 99 0 98 84 26 43 30 20 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0071.1 PB0071 1 Sox4_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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