Detailed information of matrix profile PB0065.1

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Profile summary
Name: Sox15_1
Matrix ID: PB0065.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P43267  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 43 38 33 12 13 41 89 2 2 8 5 7 23 37 29 23 45 ]
C [ 19 12 22 31 46 10 1 1 1 1 1 9 49 20 34 28 12 ]
G [ 19 18 24 12 10 1 2 1 1 89 1 5 7 9 17 21 14 ]
T [ 19 33 21 46 30 48 9 97 96 2 93 80 22 34 20 28 29 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0065.1 PB0065 1 Sox15_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: