Detailed information of matrix profile PB0055.1

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Profile summary
Name: Rfx4_1
Matrix ID: PB0055.1
Class: Winged Helix-Turn-Helix
Family: RFX
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8HWA6  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 16 7 1 0 1 4 0 0 98 23 1 9 22 33 ]
C [ 22 37 46 0 1 3 0 95 22 0 12 3 18 14 21 ]
G [ 18 18 35 99 0 0 95 0 1 1 25 96 56 28 32 ]
T [ 28 28 11 0 99 96 1 4 77 0 40 0 17 36 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0055.1 PB0055 1 Rfx4_1 Mus musculus
RFX Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: