Detailed information of matrix profile MA0114.3

Profile summary

Name: Hnf4a
Matrix ID: MA0114.3
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12385991
Uniprot ID: P49698  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 2174 784 135 191 962 5162 3 0 11 0 122 5162 711 1 5 467 ]
C [ 906 1121 709 4 131 7 5162 52 69 159 5 564 5162 5162 3538 3292 ]
G [ 1064 1109 35 5162 5162 5 1 0 0 2 5162 66 14 0 23 587 ]
T [ 1019 2148 4452 0 129 0 0 5162 5162 5162 1 148 211 6 1624 1870 ]

Binding sites information

No Binding sites available for this model.

External links