# MATRIX_ANNOTATION

TAG: comment
VAL:
  Annotations from PAZAR NFAT1_MOUSE + NFAT1_HUMAN + NFAT1_RAT (TF0000191, TF0000193, TF0000195) in the pleiades genes project.


TAG: comment
VAL:
  Annotations from PAZAR NR4A2_MOUSE + NR4A2_RAT + NR4A2_HUMAN (TF0000135, TF0000153, TF0000157) in the pleiades genes project.


TAG: comment
VAL:
  Annotations from PAZAR CREB1_RAT + CREB1_HUMAN + CREB1_MOUSE in the pleiades genes project (TF0000110, TF0000150, TF0000732).


TAG: comment
VAL:
  Annotations from PAZAR SOX10_RAT + SOX10_HUMAN + SOX10_MOUSE (TF0000223, TF0000224, TF0000226) in the pleiades genes project.


TAG: comment
VAL:
  The profile has been trimmed to keep the core DNA-binding of the TF since the right part of the motif is bound by something we do not know.


TAG: comment
VAL:
  the purified XtrLin28b CSD was crystallized either alone or in complex with the ssDNA oligonucleotides dT7 (TTT TTT T) or dT6 (TTT TTT) or the ssRNA oligonucleotide rU6 (UUU UUU).


TAG: comment
VAL:
  This motif corresponds to the expected CREM motif, however the centrality log10(p-value) is 0 (even when the centrality is clear in the plot) because the dataset contains >100,00 peaks .


TAG: comment
VAL:
  TF has several motif variants. The ab used for ChIP was done using recombinant protein containing regions shared by LEC1-A and LEC1-B. Therefore the profile could be for either or both LEC1-A and B.


