MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0701.1 LHX9 letter-probability matrix: alength= 4 w= 8 nsites= 1500 E= 0 0.188667 0.379333 0.199333 0.232667 0.076970 0.479680 0.000000 0.443350 0.740741 0.143210 0.045926 0.070123 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.035465 0.065435 0.149850 0.749251 0.875657 0.016346 0.065966 0.042032 0.372248 0.147432 0.352902 0.127418 URL http://jaspar.genereg.net/matrix/MA0701.1 MOTIF MA1185.1 LHY1 letter-probability matrix: alength= 4 w= 10 nsites= 599 E= 0 0.854758 0.001669 0.051753 0.091820 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.996661 0.003339 0.000000 0.000000 0.000000 0.013356 0.008347 0.978297 0.005008 0.000000 0.005008 0.989983 0.085142 0.010017 0.000000 0.904841 0.287145 0.076795 0.056761 0.579299 0.188648 0.240401 0.195326 0.375626 URL http://jaspar.genereg.net/matrix/MA1185.1 MOTIF MA0619.1 LIN54 letter-probability matrix: alength= 4 w= 9 nsites= 999 E= 0 0.411411 0.091091 0.212212 0.285285 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.212000 0.000000 0.788000 0.438000 0.000000 0.562000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.104000 0.211000 0.000000 0.685000 0.242757 0.248751 0.158841 0.349650 URL http://jaspar.genereg.net/matrix/MA0619.1 MOTIF CN0001.1 LM1 letter-probability matrix: alength= 4 w= 16 nsites= 5332 E= 0 0.168230 0.079895 0.383721 0.368155 0.045949 0.003938 0.918792 0.031320 0.009377 0.051013 0.010315 0.929295 0.031508 0.018942 0.009002 0.940548 0.107839 0.052138 0.721868 0.118155 0.005064 0.874156 0.014254 0.106527 0.003563 0.904351 0.000750 0.091335 0.918980 0.022881 0.021943 0.036197 0.066954 0.029632 0.039197 0.864216 0.207802 0.000750 0.788635 0.002813 0.019505 0.006377 0.969242 0.004876 0.509002 0.249625 0.051013 0.190360 0.744561 0.018192 0.197299 0.039947 0.955551 0.010128 0.023631 0.010690 0.015191 0.915229 0.010503 0.059077 0.368530 0.346774 0.064891 0.219805 URL http://jaspar.genereg.net/matrix/CN0001.1 MOTIF CN0010.1 LM10 letter-probability matrix: alength= 4 w= 18 nsites= 5914 E= 0 0.207474 0.286270 0.162834 0.343422 0.154887 0.100440 0.461447 0.283226 0.065607 0.014542 0.881975 0.037876 0.012682 0.077443 0.010484 0.899391 0.012513 0.063747 0.031789 0.891951 0.109740 0.120900 0.354921 0.414440 0.007440 0.918668 0.004396 0.069496 0.009469 0.859655 0.001691 0.129185 0.735374 0.109063 0.001184 0.154379 0.174839 0.052249 0.052418 0.720494 0.098749 0.001860 0.887724 0.011667 0.039060 0.022151 0.926615 0.012175 0.509976 0.326006 0.004565 0.159452 0.809435 0.009131 0.119378 0.062056 0.966520 0.014204 0.009807 0.009469 0.022827 0.918329 0.015218 0.043625 0.562902 0.285932 0.011498 0.139669 0.455867 0.108725 0.349002 0.086405 URL http://jaspar.genereg.net/matrix/CN0010.1 MOTIF CN0100.1 LM100 letter-probability matrix: alength= 4 w= 15 nsites= 125 E= 0 0.944000 0.016000 0.016000 0.024000 0.000000 0.952000 0.024000 0.024000 0.008000 0.000000 0.016000 0.976000 0.024000 0.000000 0.976000 0.000000 0.720000 0.000000 0.280000 0.000000 0.008000 0.008000 0.984000 0.000000 0.000000 0.984000 0.008000 0.008000 0.984000 0.000000 0.016000 0.000000 0.000000 0.016000 0.008000 0.976000 0.000000 0.000000 0.984000 0.016000 0.008000 0.960000 0.000000 0.032000 0.000000 0.424000 0.024000 0.552000 0.000000 0.968000 0.008000 0.024000 0.720000 0.072000 0.152000 0.056000 0.040000 0.112000 0.832000 0.016000 URL http://jaspar.genereg.net/matrix/CN0100.1 MOTIF CN0101.1 LM101 letter-probability matrix: alength= 4 w= 18 nsites= 153 E= 0 0.738562 0.091503 0.032680 0.137255 0.026144 0.006536 0.013072 0.954248 0.000000 0.091503 0.006536 0.901961 0.065359 0.000000 0.006536 0.928105 0.045752 0.032680 0.908497 0.013072 0.013072 0.954248 0.006536 0.026144 0.941176 0.032680 0.006536 0.019608 0.013072 0.019608 0.013072 0.954248 0.725490 0.019608 0.084967 0.169935 0.071895 0.588235 0.156863 0.183007 0.947712 0.006536 0.006536 0.039216 0.006536 0.013072 0.000000 0.980392 0.006536 0.065359 0.000000 0.928105 0.026144 0.000000 0.019608 0.954248 0.052288 0.013072 0.888889 0.045752 0.013072 0.941176 0.006536 0.039216 0.934641 0.032680 0.000000 0.032680 0.071895 0.078431 0.019608 0.830065 URL http://jaspar.genereg.net/matrix/CN0101.1 MOTIF CN0102.1 LM102 letter-probability matrix: alength= 4 w= 18 nsites= 302 E= 0 0.036424 0.029801 0.052980 0.880795 0.009934 0.910596 0.049669 0.029801 0.966887 0.023179 0.000000 0.009934 0.966887 0.009934 0.016556 0.006623 0.950331 0.003311 0.033113 0.013245 0.019868 0.013245 0.943709 0.023179 0.029801 0.592715 0.016556 0.360927 0.721854 0.066225 0.178808 0.033113 0.076159 0.844371 0.023179 0.056291 0.023179 0.016556 0.000000 0.960265 0.026490 0.043046 0.023179 0.907285 0.009934 0.039735 0.016556 0.933775 0.509934 0.062914 0.175497 0.251656 0.092715 0.831126 0.029801 0.046358 0.940397 0.003311 0.023179 0.033113 0.880795 0.026490 0.059603 0.033113 0.639073 0.033113 0.235099 0.092715 0.102649 0.589404 0.059603 0.248344 URL http://jaspar.genereg.net/matrix/CN0102.1 MOTIF CN0103.1 LM103 letter-probability matrix: alength= 4 w= 17 nsites= 301 E= 0 0.870432 0.006645 0.106312 0.016611 0.936877 0.016611 0.033223 0.013289 0.936877 0.003322 0.036545 0.023256 0.043189 0.000000 0.036545 0.920266 0.036545 0.026578 0.916944 0.019934 0.033223 0.162791 0.109635 0.694352 0.033223 0.883721 0.033223 0.049834 0.920266 0.009967 0.006645 0.063123 0.189369 0.564784 0.209302 0.036545 0.006645 0.986711 0.000000 0.006645 0.936877 0.033223 0.000000 0.029900 0.026578 0.016611 0.332226 0.624585 0.089701 0.843854 0.026578 0.039867 0.033223 0.003322 0.000000 0.963455 0.023256 0.046512 0.883721 0.046512 0.096346 0.152824 0.325581 0.425249 0.272425 0.073090 0.159468 0.495017 URL http://jaspar.genereg.net/matrix/CN0103.1 MOTIF CN0104.1 LM104 letter-probability matrix: alength= 4 w= 15 nsites= 47 E= 0 0.063830 0.106383 0.063830 0.765957 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.957447 0.042553 0.000000 0.000000 0.021277 0.978723 0.000000 0.000000 0.021277 0.936170 0.000000 0.042553 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.021277 0.978723 0.063830 0.000000 0.000000 0.936170 0.872340 0.106383 0.021277 0.000000 1.000000 0.000000 0.000000 0.000000 0.957447 0.000000 0.042553 0.000000 0.063830 0.000000 0.872340 0.063830 0.297872 0.638298 0.000000 0.063830 0.191489 0.234043 0.042553 0.531915 URL http://jaspar.genereg.net/matrix/CN0104.1