MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0148.2 FOXA1 letter-probability matrix: alength= 4 w= 11 nsites= 892 E= 0 0.014574 0.001121 0.002242 0.982063 0.120805 0.007830 0.863535 0.007830 0.001115 0.007804 0.004459 0.986622 0.004459 0.007804 0.026756 0.960981 0.006689 0.003344 0.085842 0.904125 0.533482 0.013393 0.410714 0.042411 0.004464 0.901786 0.005580 0.088170 0.322545 0.118304 0.005580 0.553571 0.046980 0.412752 0.077181 0.463087 0.424888 0.007848 0.026906 0.540359 0.099776 0.140135 0.523543 0.236547 URL http://jaspar.genereg.net/matrix/MA0148.2 MOTIF MA0148.3 FOXA1 letter-probability matrix: alength= 4 w= 15 nsites= 22008 E= 0 0.196656 0.219329 0.187386 0.396628 0.211696 0.311296 0.214967 0.262041 0.139131 0.388859 0.241458 0.230553 0.324200 0.196156 0.165440 0.314204 0.003181 0.000000 0.000545 0.996274 0.267312 0.000000 0.732688 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.058706 0.941294 0.000000 0.000000 0.129907 0.870093 0.829335 0.000000 0.170665 0.000000 0.000000 0.934024 0.000000 0.065976 0.417712 0.120638 0.000000 0.461650 0.037577 0.331516 0.063250 0.567657 0.486278 0.000045 0.002863 0.510814 0.218421 0.118275 0.427799 0.235505 URL http://jaspar.genereg.net/matrix/MA0148.3 MOTIF MA0845.1 FOXB1 letter-probability matrix: alength= 4 w= 11 nsites= 7303 E= 0 0.327674 0.037245 0.026017 0.609065 0.697065 0.034312 0.195434 0.073190 0.265533 0.029191 0.054767 0.650509 0.141722 0.006603 0.836513 0.015163 0.024410 0.032547 0.015324 0.927719 0.699814 0.279010 0.010731 0.010445 0.920108 0.028648 0.000000 0.051244 0.956649 0.006573 0.006573 0.030206 0.004015 0.322960 0.014915 0.658110 0.957453 0.000000 0.021973 0.020574 0.249086 0.083760 0.081275 0.585879 URL http://jaspar.genereg.net/matrix/MA0845.1 MOTIF MA0032.1 FOXC1 letter-probability matrix: alength= 4 w= 8 nsites= 16 E= 0 0.250000 0.250000 0.312500 0.187500 0.125000 0.312500 0.375000 0.187500 0.250000 0.250000 0.187500 0.312500 0.375000 0.250000 0.312500 0.062500 0.437500 0.187500 0.125000 0.250000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 URL http://jaspar.genereg.net/matrix/MA0032.1 MOTIF MA0032.2 FOXC1 letter-probability matrix: alength= 4 w= 11 nsites= 19566 E= 0 0.329756 0.039456 0.015537 0.615251 0.695239 0.035335 0.202155 0.067272 0.344387 0.087613 0.105677 0.462324 0.257364 0.017800 0.722134 0.002702 0.108394 0.071742 0.016937 0.802927 0.706925 0.289518 0.001132 0.002425 0.991155 0.005790 0.000000 0.003056 0.983562 0.002979 0.007501 0.005958 0.006497 0.467700 0.008787 0.517015 0.966341 0.001411 0.022631 0.009617 0.316820 0.073650 0.052331 0.557200 URL http://jaspar.genereg.net/matrix/MA0032.2 MOTIF MA0846.1 FOXC2 letter-probability matrix: alength= 4 w= 12 nsites= 22189 E= 0 0.402857 0.057641 0.020461 0.519041 0.698610 0.056419 0.173935 0.071036 0.417612 0.128451 0.115628 0.338310 0.305154 0.020921 0.667459 0.006466 0.075504 0.142082 0.012088 0.770326 0.745916 0.246463 0.003172 0.004449 0.974652 0.016390 0.003859 0.005098 0.970306 0.004981 0.013234 0.011479 0.001508 0.702262 0.003308 0.292921 0.969479 0.004787 0.015545 0.010190 0.548221 0.086051 0.070507 0.295221 0.419897 0.117625 0.101165 0.361314 URL http://jaspar.genereg.net/matrix/MA0846.1 MOTIF MA0031.1 FOXD1 letter-probability matrix: alength= 4 w= 8 nsites= 20 E= 0 0.050000 0.050000 0.850000 0.050000 0.000000 0.000000 0.000000 1.000000 0.950000 0.050000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.900000 0.050000 0.050000 0.000000 0.050000 0.900000 0.000000 0.050000 1.000000 0.000000 0.000000 0.000000 0.350000 0.100000 0.150000 0.400000 URL http://jaspar.genereg.net/matrix/MA0031.1 MOTIF MA0847.1 FOXD2 letter-probability matrix: alength= 4 w= 7 nsites= 1949 E= 0 0.310416 0.027193 0.646998 0.015393 0.103943 0.152927 0.000000 0.743130 0.823114 0.123952 0.000000 0.052933 0.943854 0.029843 0.010116 0.016186 0.981589 0.000000 0.000000 0.018411 0.000000 0.718585 0.014784 0.266631 0.823841 0.000000 0.098455 0.077704 URL http://jaspar.genereg.net/matrix/MA0847.1 MOTIF MA0030.1 FOXF2 letter-probability matrix: alength= 4 w= 14 nsites= 27 E= 0 0.037037 0.370370 0.259259 0.333333 0.370370 0.259259 0.185185 0.185185 0.629630 0.148148 0.074074 0.148148 0.464286 0.178571 0.178571 0.178571 0.136364 0.500000 0.363636 0.000000 0.259259 0.000000 0.740741 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.925926 0.000000 0.074074 1.000000 0.000000 0.000000 0.000000 0.592593 0.148148 0.074074 0.185185 0.259259 0.148148 0.222222 0.370370 URL http://jaspar.genereg.net/matrix/MA0030.1 MOTIF MA0613.1 FOXG1 letter-probability matrix: alength= 4 w= 8 nsites= 999 E= 0 0.374374 0.001001 0.623624 0.001001 0.001000 0.001000 0.001000 0.997000 0.997000 0.001000 0.001000 0.001000 0.997000 0.001000 0.001000 0.001000 0.997000 0.001000 0.001000 0.001000 0.001000 0.997000 0.001000 0.001000 0.997000 0.001000 0.001000 0.001000 0.498000 0.167000 0.002000 0.333000 URL http://jaspar.genereg.net/matrix/MA0613.1