MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0075.1 Prrx2 letter-probability matrix: alength= 4 w= 5 nsites= 59 E= 0 0.881356 0.033898 0.067797 0.016949 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.016949 0.983051 0.000000 0.000000 0.000000 1.000000 0.983051 0.000000 0.016949 0.000000 URL http://jaspar.genereg.net/matrix/MA0075.1 MOTIF PH0155.1 Prrx2 letter-probability matrix: alength= 4 w= 17 nsites= 100 E= 0 0.580000 0.040000 0.120000 0.260000 0.320000 0.260000 0.250000 0.170000 0.410000 0.280000 0.110000 0.200000 0.277228 0.089109 0.554455 0.079208 0.020202 0.707071 0.010101 0.262626 0.000000 0.120000 0.000000 0.880000 0.990000 0.000000 0.010000 0.000000 0.980198 0.000000 0.009901 0.009901 0.009901 0.009901 0.000000 0.980198 0.000000 0.010000 0.000000 0.990000 0.880000 0.000000 0.120000 0.000000 0.262626 0.010101 0.707071 0.020202 0.029703 0.534653 0.039604 0.396040 0.181818 0.171717 0.414141 0.232323 0.435644 0.148515 0.257426 0.158416 0.420000 0.150000 0.180000 0.250000 0.300000 0.200000 0.260000 0.240000 URL http://jaspar.genereg.net/matrix/PH0155.1 MOTIF MA0075.2 Prrx2 letter-probability matrix: alength= 4 w= 8 nsites= 3850 E= 0 0.167273 0.395325 0.185714 0.251688 0.090324 0.455393 0.055482 0.398802 0.782317 0.073374 0.083740 0.060569 0.900351 0.054269 0.029006 0.016374 0.003338 0.005648 0.002824 0.988190 0.092131 0.099644 0.047252 0.760973 0.858003 0.044137 0.008694 0.089166 0.320603 0.228111 0.268901 0.182385 URL http://jaspar.genereg.net/matrix/MA0075.2 MOTIF MA0201.1 Ptx1 letter-probability matrix: alength= 4 w= 7 nsites= 20 E= 0 0.000000 0.250000 0.050000 0.700000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.950000 0.000000 0.050000 URL http://jaspar.genereg.net/matrix/MA0201.1 MOTIF PF0125.1 RAAGNYNNCTTY letter-probability matrix: alength= 4 w= 12 nsites= 516 E= 0 0.565891 0.000000 0.434109 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.153101 0.199612 0.343023 0.304264 0.000000 0.434109 0.000000 0.565891 0.286822 0.201550 0.255814 0.255814 0.234496 0.279070 0.224806 0.261628 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.445736 0.000000 0.554264 URL http://jaspar.genereg.net/matrix/PF0125.1 MOTIF PF0111.1 RACCACAR letter-probability matrix: alength= 4 w= 8 nsites= 772 E= 0 0.612694 0.000000 0.387306 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.527202 0.000000 0.472798 0.000000 URL http://jaspar.genereg.net/matrix/PF0111.1 MOTIF PF0066.1 RACTNNRTTTNC letter-probability matrix: alength= 4 w= 12 nsites= 488 E= 0 0.395492 0.000000 0.604508 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.534836 0.262295 0.086066 0.116803 0.073770 0.782787 0.057377 0.086066 0.838115 0.000000 0.161885 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.063525 0.819672 0.034836 0.081967 0.000000 1.000000 0.000000 0.000000 URL http://jaspar.genereg.net/matrix/PF0066.1 MOTIF MA1416.1 RAMOSA1 letter-probability matrix: alength= 4 w= 14 nsites= 74844 E= 0 0.136283 0.052536 0.757108 0.054072 0.751363 0.046644 0.161883 0.040110 0.100035 0.036262 0.815309 0.048394 0.820667 0.035835 0.117712 0.025787 0.014697 0.020616 0.939194 0.025493 0.992291 0.004650 0.001109 0.001951 0.000120 0.001323 0.995644 0.002913 0.992999 0.003728 0.001069 0.002205 0.000120 0.001590 0.995377 0.002913 0.995604 0.002245 0.000935 0.001216 0.000468 0.001537 0.995644 0.002352 0.833307 0.027257 0.119395 0.020042 0.104431 0.029555 0.825557 0.040457 0.761317 0.034619 0.165117 0.038948 URL http://jaspar.genereg.net/matrix/MA1416.1 MOTIF MA0359.1 RAP1 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 0 0.180000 0.690000 0.120000 0.010000 0.989899 0.000000 0.000000 0.010101 0.010101 0.757576 0.000000 0.232323 0.010000 0.970000 0.010000 0.010000 0.010000 0.900000 0.000000 0.090000 0.710000 0.000000 0.270000 0.020000 0.168317 0.108911 0.079208 0.643564 0.720000 0.000000 0.140000 0.140000 0.010000 0.980000 0.000000 0.010000 0.860000 0.130000 0.000000 0.010000 URL http://jaspar.genereg.net/matrix/MA0359.1 MOTIF MA0980.1 RAP2-10 letter-probability matrix: alength= 4 w= 8 nsites= 1001 E= 0 0.032967 0.127872 0.756244 0.082917 0.022000 0.942000 0.014000 0.022000 0.116883 0.004995 0.871129 0.006993 0.006000 0.912000 0.078000 0.004000 0.004000 0.981000 0.009000 0.006000 0.009000 0.007000 0.952000 0.032000 0.008000 0.838000 0.085000 0.069000 0.033000 0.859000 0.016000 0.092000 URL http://jaspar.genereg.net/matrix/MA0980.1