MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF PH0097.1 Lhx6_2 letter-probability matrix: alength= 4 w= 17 nsites= 100 E= 0 0.310000 0.070000 0.060000 0.560000 0.313131 0.505051 0.101010 0.080808 0.237624 0.316832 0.207921 0.237624 0.330000 0.240000 0.320000 0.110000 0.040000 0.720000 0.030000 0.210000 0.010000 0.150000 0.000000 0.840000 0.810000 0.010000 0.180000 0.000000 0.990000 0.000000 0.010000 0.000000 0.000000 0.010000 0.000000 0.990000 0.000000 0.180000 0.010000 0.810000 0.840000 0.000000 0.150000 0.010000 0.210000 0.030000 0.720000 0.040000 0.070707 0.676768 0.101010 0.151515 0.160000 0.120000 0.520000 0.200000 0.220000 0.180000 0.390000 0.210000 0.290000 0.120000 0.220000 0.370000 0.150000 0.220000 0.300000 0.330000 URL http://jaspar.genereg.net/matrix/PH0097.1 MOTIF PH0098.1 Lhx8 letter-probability matrix: alength= 4 w= 17 nsites= 100 E= 0 0.380000 0.200000 0.140000 0.280000 0.270000 0.440000 0.160000 0.130000 0.330000 0.360000 0.170000 0.140000 0.290000 0.390000 0.250000 0.070000 0.060000 0.850000 0.050000 0.040000 0.010000 0.170000 0.000000 0.820000 0.860000 0.010000 0.130000 0.000000 0.989899 0.000000 0.010101 0.000000 0.000000 0.010101 0.000000 0.989899 0.000000 0.130000 0.010000 0.860000 0.820000 0.000000 0.170000 0.010000 0.040000 0.050000 0.850000 0.060000 0.020000 0.730000 0.090000 0.160000 0.140000 0.120000 0.490000 0.250000 0.150000 0.120000 0.500000 0.230000 0.079208 0.188119 0.198020 0.534653 0.180000 0.140000 0.510000 0.170000 URL http://jaspar.genereg.net/matrix/PH0098.1 MOTIF MA0705.1 Lhx8 letter-probability matrix: alength= 4 w= 8 nsites= 5093 E= 0 0.092676 0.508148 0.181622 0.217554 0.000000 0.281603 0.000000 0.718397 0.735626 0.023115 0.241260 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.286796 0.012116 0.701088 0.725253 0.000000 0.274747 0.000000 0.268264 0.227023 0.423409 0.081304 URL http://jaspar.genereg.net/matrix/MA0705.1 MOTIF PH0099.1 Lhx9 letter-probability matrix: alength= 4 w= 17 nsites= 100 E= 0 0.140000 0.550000 0.140000 0.170000 0.050000 0.380000 0.350000 0.220000 0.202020 0.484848 0.060606 0.252525 0.666667 0.070707 0.141414 0.121212 0.100000 0.270000 0.040000 0.590000 0.020000 0.150000 0.000000 0.830000 0.950495 0.029703 0.019802 0.000000 0.970000 0.000000 0.020000 0.010000 0.010000 0.020000 0.000000 0.970000 0.000000 0.019802 0.029703 0.950495 0.830000 0.000000 0.150000 0.020000 0.590000 0.040000 0.270000 0.100000 0.180000 0.100000 0.110000 0.610000 0.210000 0.360000 0.160000 0.270000 0.510000 0.260000 0.150000 0.080000 0.160000 0.440000 0.210000 0.190000 0.090000 0.370000 0.180000 0.360000 URL http://jaspar.genereg.net/matrix/PH0099.1 MOTIF MA0194.1 Lim1 letter-probability matrix: alength= 4 w= 7 nsites= 18 E= 0 0.000000 0.111111 0.000000 0.888889 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.944444 0.000000 0.055556 0.000000 URL http://jaspar.genereg.net/matrix/MA0194.1 MOTIF MA0195.1 Lim3 letter-probability matrix: alength= 4 w= 7 nsites= 20 E= 0 0.150000 0.350000 0.100000 0.400000 0.200000 0.000000 0.000000 0.800000 0.800000 0.000000 0.150000 0.050000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.100000 0.200000 0.700000 0.800000 0.000000 0.200000 0.000000 URL http://jaspar.genereg.net/matrix/MA0195.1 MOTIF PH0100.1 Lmx1a letter-probability matrix: alength= 4 w= 17 nsites= 100 E= 0 0.160000 0.510000 0.250000 0.080000 0.170000 0.210000 0.480000 0.140000 0.430000 0.180000 0.160000 0.230000 0.420000 0.130000 0.130000 0.320000 0.060000 0.130000 0.040000 0.770000 0.030000 0.040000 0.000000 0.930000 0.930693 0.009901 0.009901 0.049505 0.969697 0.000000 0.000000 0.030303 0.030303 0.000000 0.000000 0.969697 0.049505 0.009901 0.009901 0.930693 0.930000 0.000000 0.040000 0.030000 0.770000 0.040000 0.130000 0.060000 0.500000 0.060000 0.090000 0.350000 0.525253 0.121212 0.050505 0.303030 0.480000 0.180000 0.070000 0.270000 0.220000 0.370000 0.150000 0.260000 0.170000 0.340000 0.170000 0.320000 URL http://jaspar.genereg.net/matrix/PH0100.1 MOTIF PH0101.1 Lmx1b letter-probability matrix: alength= 4 w= 17 nsites= 101 E= 0 0.336634 0.217822 0.306931 0.138614 0.250000 0.130000 0.390000 0.230000 0.320000 0.090000 0.150000 0.440000 0.370000 0.050000 0.090000 0.490000 0.360000 0.090000 0.060000 0.490000 0.020000 0.160000 0.020000 0.800000 0.020000 0.020000 0.000000 0.960000 0.970000 0.010000 0.000000 0.020000 0.970297 0.000000 0.009901 0.019802 0.019802 0.009901 0.000000 0.970297 0.020000 0.000000 0.010000 0.970000 0.960000 0.000000 0.020000 0.020000 0.800000 0.020000 0.160000 0.020000 0.237624 0.118812 0.118812 0.524752 0.280000 0.100000 0.190000 0.430000 0.247525 0.257426 0.138614 0.356436 0.140000 0.250000 0.350000 0.260000 URL http://jaspar.genereg.net/matrix/PH0101.1 MOTIF MA0326.1 MAC1 letter-probability matrix: alength= 4 w= 8 nsites= 1740 E= 0 0.062069 0.000000 0.000000 0.937931 0.050597 0.000000 0.124503 0.824901 0.000000 0.000000 0.000000 1.000000 0.067095 0.000000 0.932905 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.555041 0.000000 0.379490 0.065469 URL http://jaspar.genereg.net/matrix/MA0326.1 MOTIF MF0008.1 MADS class letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 0 0.031800 0.910400 0.017600 0.040200 0.011100 0.493800 0.013400 0.481700 0.700370 0.074607 0.037504 0.187519 0.177200 0.051900 0.053400 0.717500 0.527300 0.008900 0.011000 0.452800 0.164000 0.004400 0.004400 0.827200 0.530300 0.020000 0.035800 0.413900 0.179400 0.049900 0.032900 0.737800 0.281200 0.000000 0.703700 0.015100 0.053700 0.017800 0.845500 0.083000 URL http://jaspar.genereg.net/matrix/MF0008.1