Detailed information of matrix profile PL0002.1

  1. Home
  2. Matrix > PL0002.1

Profile summary
Name: hlh-2::hlh-3
Matrix ID: PL0002.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q17588   Q22717  
Source:
Comment: heterodimer

Sequence logo

Frequency matrix

         
A [ 29 39 14 22 61 11 0 98 0 12 0 0 0 14 39 17 15 ]
C [ 14 12 21 19 7 3 98 0 0 2 0 0 12 29 24 36 23 ]
G [ 33 25 21 22 24 84 0 0 98 84 0 98 41 6 18 13 28 ]
T [ 22 21 42 35 5 0 0 0 0 0 98 0 44 49 17 32 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0002.1 PL0002 1 hlh-2::hlh-3 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: