Detailed information of matrix profile PH0037.1

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Profile summary
Name: Hdx
Matrix ID: PH0037.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q14B70  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 34 5 20 30 21 70 83 92 2 3 86 18 23 14 34 40 ]
C [ 20 18 9 12 31 2 23 1 1 2 90 4 22 33 30 35 23 ]
G [ 21 26 52 35 16 72 5 6 3 3 4 1 16 20 31 6 19 ]
T [ 27 22 35 33 24 4 2 10 5 93 3 8 45 24 26 26 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0037.1 PH0037 1 Hdx Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: