Detailed information of matrix profile PH0030.1

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Profile summary
Name: Esx1
Matrix ID: PH0030.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9Z2U3  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 26 17 21 42 3 1 98 98 0 1 92 49 10 22 11 52 ]
C [ 24 18 34 35 7 47 7 0 0 1 1 0 1 16 12 26 7 ]
G [ 17 15 18 23 41 1 0 1 1 0 0 7 47 15 30 45 4 ]
T [ 26 42 31 21 10 49 92 1 0 98 98 1 3 60 36 19 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0030.1 PH0030 1 Esx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: