Detailed information of matrix profile PH0011.1

  1. Home
  2. Matrix > PH0011.1

Profile summary
Name: Alx1_2
Matrix ID: PH0011.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8C8B0  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 33 29 32 2 1 98 98 1 0 95 74 16 17 24 26 27 ]
C [ 41 21 46 20 24 4 0 0 1 1 0 1 22 23 20 21 34 ]
G [ 20 35 10 26 1 0 1 1 0 0 4 24 20 19 32 29 21 ]
T [ 22 10 14 21 74 95 0 1 98 98 1 2 43 40 23 25 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0011.1 PH0011 1 Alx1_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: