Detailed information of matrix profile PH0008.1

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Profile summary
Name: Barx2
Matrix ID: PH0008.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: O08686  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 52 24 42 63 15 1 96 98 1 1 72 31 2 20 51 ]
C [ 33 11 32 38 11 35 27 3 1 0 0 0 39 23 12 15 ]
G [ 11 20 10 10 23 23 0 0 0 1 3 27 20 11 17 15 ]
T [ 38 18 34 10 2 27 72 1 1 98 96 1 11 63 51 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0008.1 PH0008 1 Barx2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: