Detailed information of matrix profile PH0004.1

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Profile summary
Name: Nkx3-2
Matrix ID: PH0004.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P97503  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 14 20 11 18 6 95 99 0 5 10 1 25 8 49 34 11 ]
C [ 17 12 24 28 15 0 0 0 0 0 0 26 11 20 14 7 24 ]
G [ 33 19 25 34 4 1 5 1 96 0 90 68 13 16 14 23 35 ]
T [ 19 55 31 27 64 93 0 0 4 95 0 5 51 56 23 36 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0004.1 PH0004 1 Nkx3-2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: