Detailed information of matrix profile PB0001.1

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Profile summary
Name: Arid3a_1
Matrix ID: PB0001.1
Class: Helix-Turn-Helix
Family: Arid
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q62431  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 26 37 35 19 27 9 4 70 89 11 11 82 72 39 26 22 17 ]
C [ 20 13 19 6 9 11 10 1 0 0 18 5 8 19 34 35 38 ]
G [ 30 23 23 28 5 8 5 18 0 0 1 10 11 20 21 22 27 ]
T [ 24 27 23 47 60 72 82 11 11 89 70 4 9 22 18 21 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0001.1 PB0001 1 Arid3a_1 Mus musculus
Arid Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: