Detailed information of matrix profile MA1045.1

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Profile summary
Name: NAC043
Matrix ID: MA1045.1
Class: NAC/NAM
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q84WP6  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 280 65 0 755 0 0 0 475 863 185 ]
C [ 205 65 0 0 1000 0 280 83 46 185 ]
G [ 205 65 0 245 0 924 0 0 46 185 ]
T [ 310 806 1000 0 0 76 719 442 46 444 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1045.1 MA1045 1 NAC043 Arabidopsis thaliana
NAC/NAM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0373.1

ChIP-seq Centrality
log(P-value): -6215.68

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0373.1

ChIP-seq Centrality
log(P-value): -6038.34

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: