Detailed information of matrix profile MA1022.1

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Profile summary
Name: PHYPADRAFT_38837
Matrix ID: MA1022.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Physcomitrella patens
Data Type: PBM
Validation: 10758479
Uniprot ID: A9TZG0  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 227 259 374 52 86 82 81 323 217 228 ]
C [ 227 307 207 860 54 1 24 129 254 257 ]
G [ 262 174 269 27 216 62 68 85 186 264 ]
T [ 283 259 150 61 644 855 828 463 343 251 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1022.1 MA1022 1 PHYPADRAFT_38837 Physcomitrella patens
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: