Detailed information of matrix profile MA0983.1

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Profile summary
Name: DOF5.6
Matrix ID: MA0983.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 10758479
Uniprot ID: Q9FM03  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 388 38 24 32 10 376 239 228 ]
C [ 213 884 56 1 1 108 227 262 ]
G [ 247 28 308 40 35 84 170 257 ]
T [ 152 50 613 928 955 432 364 254 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0983.1 MA0983 1 DOF5.6 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0282.1

ChIP-seq Centrality
log(P-value): -9595.01

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0282.1

ChIP-seq Centrality
log(P-value): -7057.36

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: