Detailed information of matrix profile MA0964.1

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Profile summary
Name: BIM1
Matrix ID: MA0964.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 15680330
Uniprot ID: Q9LEZ3  
Source: 25215497
Comment: Data is from PMID:25215497

Sequence logo

Frequency matrix

         
A [ 225 268 176 6 976 3 152 132 118 250 ]
C [ 257 242 148 990 0 795 23 184 101 281 ]
G [ 262 344 301 2 23 62 766 101 655 250 ]
T [ 257 147 375 3 1 140 59 582 126 219 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0964.1 MA0964 1 BIM1 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0300.1

ChIP-seq Centrality
log(P-value): -924.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0300.1

ChIP-seq Centrality
log(P-value): -887.257

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: