Detailed information of matrix profile MA0933.1

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Profile summary
Name: AHL20
Matrix ID: MA0933.1
Class: A.T hook factors
Family: HMGA factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 22442143
Uniprot ID: Q8GWQ2  
Source:
Comment: Data is from PMID:24477691

Sequence logo

Frequency matrix

         
A [ 900 337 148 218 738 862 235 88 ]
C [ 18 3 1 4 6 13 5 73 ]
G [ 28 12 8 4 6 4 6 66 ]
T [ 54 648 843 774 250 120 753 774 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0933.1 MA0933 1 AHL20 Arabidopsis thaliana
HMGA factors A.T hook factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: