Detailed information of matrix profile MA0906.1

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Profile summary
Name: HOXC12
Matrix ID: MA0906.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P31275  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1344 515 29 25 553 4297 0 163 4297 1 417 ]
C [ 372 269 0 2 5 1 4297 12 2 4297 2172 ]
G [ 1139 636 13 0 14 2 2 4297 68 708 259 ]
T [ 1442 4297 4297 4297 4297 0 376 199 11 1260 1450 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0906.1 MA0906 1 HOXC12 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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GC Content: