Detailed information of matrix profile MA0900.1

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Profile summary
Name: HOXA2
Matrix ID: MA0900.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: O43364  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1520 1108 336 8985 8985 41 204 6221 1355 1801 ]
C [ 2040 2840 31 0 6 491 651 513 2663 2370 ]
G [ 3786 2849 135 1247 0 344 3128 2764 3394 2619 ]
T [ 1640 2188 8985 161 0 8985 5858 906 1574 2196 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0900.1 MA0900 1 HOXA2 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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