Detailed information of matrix profile MA0899.1

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Profile summary
Name: HOXA10
Matrix ID: MA0899.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P31260  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2045 2058 331 384 2422 8381 267 957 4515 1341 1651 ]
C [ 1230 1560 125 76 121 0 718 1022 59 8381 2993 ]
G [ 2089 2082 568 36 84 11 455 4516 3867 1757 1423 ]
T [ 3017 8381 8381 8381 5960 367 8381 8381 153 2425 2315 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0899.1 MA0899 1 HOXA10 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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