Detailed information of matrix profile MA0813.1

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Profile summary
Name: TFAP2B(var.3)
Matrix ID: MA0813.1
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16420676
Uniprot ID: Q92481  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 226 0 0 0 11 41 384 571 136 0 0 0 751 ]
C [ 179 163 1346 1236 837 367 392 132 22 0 0 1063 95 ]
G [ 106 897 0 0 53 200 345 469 774 871 924 329 153 ]
T [ 650 0 0 0 292 583 147 32 5 0 0 0 306 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0813.1 MA0813 1 TFAP2B(var.3) Homo sapiens
AP-2 Basic helix-span-helix factors (bHSH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0116.1

ChIP-seq Centrality
log(P-value): -6834.85

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0116.1

ChIP-seq Centrality
log(P-value): -5694.96

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: