Detailed information of matrix profile MA0794.1

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Profile summary
Name: PROX1
Matrix ID: MA0794.1
Class: Homeo domain factors
Family: HD-PROS factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21040746
Uniprot ID: Q92786  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 74 3367 3367 18 1675 299 36 2 1 420 46 1147 ]
C [ 607 39 128 12 8 3367 0 84 3367 48 94 543 ]
G [ 553 171 3 3367 1692 2 3367 21 0 229 17 1503 ]
T [ 2133 17 4 3 11 15 31 3367 63 3367 3367 174 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0794.1 MA0794 1 PROX1 Homo sapiens
HD-PROS factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0199.1

ChIP-seq Centrality
log(P-value): -503.252

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0199.1

ChIP-seq Centrality
log(P-value): -548.464

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: