Detailed information of matrix profile MA0756.1

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Profile summary
Name: ONECUT2
Matrix ID: MA0756.1
Class: Homeo domain factors
Family: HD-CUT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8887657
Uniprot ID: O95948  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 964 832 205 2378 22 0 5 2378 6 20 595 507 307 366 ]
C [ 237 238 105 0 1 1485 0 9 18 114 83 375 515 539 ]
G [ 526 576 84 14 2 16 2378 8 1 12 157 254 192 445 ]
T [ 651 1547 2378 20 2378 893 6 8 2378 2378 2378 2378 1363 1028 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0756.1 MA0756 1 ONECUT2 Homo sapiens
HD-CUT factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: