Detailed information of matrix profile MA0729.1

Profile summary

Name: RARA
Matrix ID: MA0729.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15019979
Uniprot ID: P10276  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 212 328 181 0 2 546 101 1 0 37 162 0 0 559 19 0 0 4 ]
C [ 226 228 30 1 0 0 754 759 4 3 28 4 26 1 746 745 35 513 ]
G [ 115 0 36 0 705 0 0 0 5 0 0 0 707 5 0 0 1 1 ]
T [ 0 2 539 540 0 3 0 0 522 526 526 528 2 0 1 0 507 250 ]

Binding sites information

No Binding sites available for this model.

External links