Detailed information of matrix profile MA0711.1

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Profile summary
Name: OTX1
Matrix ID: MA0711.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P32242  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 5118 745 23441 23441 243 647 789 1873 ]
C [ 6501 90 0 0 0 23441 23441 6182 ]
G [ 3186 0 254 0 3160 659 8662 10599 ]
T [ 8636 23441 544 0 23441 378 3363 4787 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0711.1 MA0711 1 OTX1 Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: