Detailed information of matrix profile MA0671.1

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Profile summary
Name: NFIX
Matrix ID: MA0671.1
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20178747
Uniprot ID: Q14938  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 6439 2399 110 0 29 2539 32864 8043 7378 ]
C [ 9135 12688 180 0 3257 32864 5911 10855 8725 ]
G [ 9039 1356 2230 32864 32864 186 9695 6134 8810 ]
T [ 8251 32864 32864 0 3 132 11279 7832 7951 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0671.1 MA0671 1 NFIX Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: