Detailed information of matrix profile MA0656.1

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Profile summary
Name: JDP2(var.2)
Matrix ID: MA0656.1
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9154808
Uniprot ID: Q8WYK2  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 3778 12283 0 1 24403 2 338 6 1939 24403 17 3623 ]
C [ 4124 835 9 4 7 24403 6 6 24403 3 1403 11036 ]
G [ 12117 12119 10 24403 24 5 24403 7 0 9 1319 5483 ]
T [ 4383 47 24403 1777 15 587 5 24403 11 3 24403 4260 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0656.1 MA0656 1 JDP2(var.2) Homo sapiens
Fos-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: