Detailed information of matrix profile MA0651.1

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Profile summary
Name: HOXC11
Matrix ID: MA0651.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: O43248  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 741 776 22 42 676 2460 0 98 2460 0 406 ]
C [ 384 279 17 0 25 0 2460 12 22 2460 1110 ]
G [ 628 431 43 0 6 0 0 2460 41 479 260 ]
T [ 707 2460 2460 2460 1784 12 569 57 38 1040 683 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0651.1 MA0651 1 HOXC11 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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GC Content: