Detailed information of matrix profile MA0631.1

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Profile summary
Name: Six3
Matrix ID: MA0631.1
Class: Homeo domain factors
Family: HD-SINE factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585360
Uniprot ID: Q62233  
Source:
Comment: Data is from Uniprobe database. Promoted from JASPAR PH0163.1 based on new evidence from Weirauch PBM (2014)

Sequence logo

Frequency matrix

         
A [ 58 27 40 32 27 2 1 99 0 95 0 7 4 10 55 12 21 ]
C [ 24 18 11 20 9 3 0 0 3 4 83 90 82 32 17 8 36 ]
G [ 11 22 8 23 45 3 97 0 0 0 1 2 7 10 5 8 9 ]
T [ 8 34 40 25 19 92 1 0 97 0 16 2 7 47 23 72 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0631.1 MA0631 1 Six3 Mus musculus
HD-SINE factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: