Detailed information of matrix profile MA0522.2

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Profile summary
Name: TCF3
Matrix ID: MA0522.2
Class: Basic helix-loop-helix factors (bHLH)
Family: E2A-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10594029
Uniprot ID: P15923  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2247 2554 5 7799 0 317 19 0 213 1839 ]
C [ 2093 1978 7799 7 465 1251 0 0 2842 1014 ]
G [ 1393 3014 21 35 7799 7799 5 7799 1321 2123 ]
T [ 2066 253 27 43 0 0 7799 0 3423 2823 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0522.1 MA0522 1 Tcf3 Mus musculus
E2A-related factors Basic helix-loop-helix factors (bHLH)
MA0522.2 MA0522 2 TCF3 Homo sapiens
E2A-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0108.1

ChIP-seq Centrality
log(P-value): -10522.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0108.1

ChIP-seq Centrality
log(P-value): -10485.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: