Detailed information of matrix profile MA0456.1

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Profile summary
Name: opa
Matrix ID: MA0456.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: bacterial 1-hybrid
Validation: 18332042
Uniprot ID: P39768  
Source:
Comment: -

Sequence logo

Frequency matrix

         
A [ 0 10 2 1 4 0 0 1 1 1 0 2 ]
C [ 16 4 2 13 0 0 0 1 1 0 1 15 ]
G [ 0 1 14 0 14 18 18 16 15 16 7 1 ]
T [ 2 3 0 4 0 0 0 0 1 1 10 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0456.1 MA0456 1 opa Drosophila melanogaster
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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