Matrix Details
This API provides an easy-to-use REST web interface to query/retrieve matrix
profile data from the latest version of the JASPAR database. The API comes
with a human browsable interface and also a programmatic interface which
return the results in eight different formats, including
json
,
jsonp
, jaspar
, meme
,
transfac
, pfm
, yaml
and
bed
.
GET /api/v1/matrix/PF0113.1/?format=api
https://jaspar2018.genereg.net/api/v1/matrix/PF0113/versions", "matrix_id": "PF0113.1", "pfm": { "G": [ 0.0, 0.0, 0.0, 0.0, 41.0, 19.0, 45.0, 31.0, 0.0, 0.0, 0.0, 0.0, 31.0 ], "C": [ 0.0, 0.0, 412.0, 62.0, 61.0, 356.0, 81.0, 83.0, 0.0, 0.0, 412.0, 412.0, 381.0 ], "T": [ 0.0, 0.0, 0.0, 350.0, 40.0, 21.0, 17.0, 203.0, 412.0, 412.0, 0.0, 0.0, 0.0 ], "A": [ 412.0, 412.0, 0.0, 0.0, 270.0, 16.0, 269.0, 95.0, 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "jaspar": "-", "type": "phylogenetic", "version": 1, "pazar_tf_ids": [], "comment": "-", "species": [], "sequence_logo": "https://jaspar2018.genereg.net/static/logos/svg/PF0113.1.svg", "sites_url": null, "medline": [ "15735639" ], "tax_group": "vertebrates", "tfe_ids": [], "family": [], "tfe_id": [], "class": [ "Unknown" ], "name": "AACYNNNNTTCCS" }{ "base_id": "PF0113", "tffm": null, "collection": "PHYLOFACTS", "pubmed_ids": [ "15735639" ], "transfac": "-", "mcs": "12.3", "uniprot_ids": [], "pazar_tf_id": [], "versions_url": "