JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA0165.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "base_id": "MA0165",
    "collection": "CORE",
    "pubmed_ids": [
        "18332042"
    ],
    "tffm": null,
    "uniprot_ids": [
        "P09087"
    ],
    "pazar_tf_id": [],
    "versions_url": "https://jaspar2018.genereg.net/api/v1/matrix/MA0165/versions",
    "matrix_id": "MA0165.1",
    "pfm": {
        "G": [
            0.0,
            0.0,
            0.0,
            0.0,
            0.0,
            11.0,
            5.0
        ],
        "C": [
            0.0,
            0.0,
            0.0,
            0.0,
            3.0,
            0.0,
            0.0
        ],
        "T": [
            20.0,
            21.0,
            16.0,
            0.0,
            18.0,
            7.0,
            3.0
        ],
        "A": [
            1.0,
            0.0,
            5.0,
            21.0,
            0.0,
            3.0,
            13.0
        ]
    },
    "type": "bacterial 1-hybrid",
    "version": 1,
    "pazar_tf_ids": [],
    "tfbs_shape_id": "3",
    "comment": "-",
    "species": [
        {
            "tax_id": 7227,
            "name": "Drosophila melanogaster"
        }
    ],
    "sequence_logo": "https://jaspar2018.genereg.net/static/logos/svg/MA0165.1.svg",
    "sites_url": null,
    "medline": [
        "18332042"
    ],
    "tax_group": "insects",
    "tfe_ids": [],
    "family": [
        "HOX-related factors"
    ],
    "tfe_id": [],
    "class": [
        "Homeo domain factors"
    ],
    "name": "Abd-B"
}

Matrix Details